You are here

Presentations

Presentations by CMSP Staff

June 2016

"Proteogenomics in Galaxy: Identifying novel ‘constellations’ of proteoforms using transcriptomic and proteomic data." by Pratik Jagtap at the Galaxy Community Conference at Bloomington, IN. Slides published in F1000 Research

"Galaxy for Proteomics Data Analysis: An Interactive Demonstration" by Tim Griffin and Pratik Jagtap at the at 64th Annual Conference of American Society of Mass Spectrometry and Allied Topics" at San Antonio, TX. 

"Galaxy-P: recent developments and emerging applications" by Tim Griffin at the at 64th Annual Conference of American Society of Mass Spectrometry and Allied Topics" at San Antonio, TX. 

"An ABRF-PRG study: Identification of low abundance proteins in a highly complex protein sample" by Susan Van Riper at the at 64th Annual Conference of American Society of Mass Spectrometry and Allied Topics" at San Antonio, TX. 

"Complementary ERLIC and RPLC online separations significantly expand sequence coverage in MS-based proteomic and proteogenomic studies" by Candace Guerrero at the at 64th Annual Conference of American Society of Mass Spectrometry and Allied Topics" at San Antonio, TX. 

"From Start to Finish: a complete proteogenomic informatics environment implemented in the Galaxy" by Getiria Onsongo at the at 64th Annual Conference of American Society of Mass Spectrometry and Allied Topics" at San Antonio, TX. 

"A Multi-omics Visualization Platform (MVP) Plug-in for Galaxy-based Applications" by Thomas McGowan at the at 64th Annual Conference of American Society of Mass Spectrometry and Allied Topics" at San Antonio, TX. 

"Embracing Complexity and Diversity: Discovery Metaproteomics of Multiple Microbiomes using the Galaxy Framework" by Pratik Jagtap at the at 64th Annual Conference of American Society of Mass Spectrometry and Allied Topics" at San Antonio, TX. Video of oral presentation here.

May 2016

"Metaproteomics studies using Galaxy-P platform" by Pratik Jagtap at Biological Mass Spectrometry Meeting Group.

April 2016

 Current and emerging services in proteomics and metabolomics through the Center for Mass Spectrometry and Proteomics" by Pratik Jagtap at Veterinary Biomedical Sciences Faculty Meeting, St. Paul, MN.

March 2016

 Current and emerging services in proteomics and metabolomics through the Center for Mass Spectrometry and Proteomics" by Tim Griffin and Pratik Jagtap at Institute for Molecular Virology Education and Career Development Series, Minneapolis, MN.

 "Enabling New Discoveries Using the Multi-Omic Galaxy Platform" by Pratik Jagtap at College of Veterinary Medicine Seminar Series, St. Paul, MN.

February 2016

 "New biochemical discoveries made possible by multi-omics" by Tim Griffin at University of Wisconsin, LaCrosse, WI.

November 2015

 "Proteomics Data Analysis using Galaxy-P" by Pratik Jagtap at GERO 8021 Application of Proteomics to Aging Fall 2015.

October 2015

 "Proteogenomics & Metaproteomics analysis using the Galaxy Platform" by Pratik Jagtap at CSIR-Institute of Genomics and Integrative Biology, New Delhi (9/30);  Jawaharlal Nehru University, New Delhi (10/1).

September 2015

 "Proteogenomics & Metaproteomics analysis using the Galaxy Platform" by Pratik Jagtap at Indian Institute of Technology, Mumbai (9/21);  Center for Cellular and Molecular Biology, Hyderabad (9/23); Indian Institute of Chemical Technology, Hyderabad (9/24).

July 2015

 "Extending Galaxy’s reach: recent progress towards complete multi-omic data analysis workflowsby Tim Griffin at the "Galaxy Community Conference" at Norwich, United Kingdom.

June 2015

 "The Workshop, oral presentation and poster presentations" by Center for Mass Spectrometry and Proteomics Staff at the "63rd Annual Conference of American Society of Mass Spectrometry and Allied Topics" at St. Louis, MO.

March 2015

"The Galaxy Framework as a Bioinformatics solution for proteomics and multi-omics studies" by Pratik Jagtap at the "Association of BioMolecular Resource Facilities 2015 Conference" at St. Louis, MO.

December 2014

"Protein Mass Spectrometry" by LeeAnn Higgins for BIOC 4125 Laboratory in Molecular Biology

October 2014

 " 'Recyclomics' Old Datasets, New Databases...'" by Pratik Jagtap at Biological Mass Spectrometry Meeting Group (Griffin Lab).

September 2014

 "Introduction to CMSP" by Pratik Jagtap at the Biodale Science Salon organized by Minnesota Academy of Sciences and Biotechnology Institute at St. Paul, MN.

July 2014

 See Video of "The Galaxy framework as a unifying bioinformatics solution for multi-omicdata analysis" by Pratik Jagtap at the Galaxy Community Conference at Baltimore, MD. Also on slideshare.

June 2014

 "Public sharing of complex MS-based qualitative and quantitative proteomic data analysis workflows: adding value to big data repositories" by Tim Griffin at the 61st Annual Conference of American Society for Mass Spectrometry at Baltimore, MD.

April 2014

 "Learnings from Albuquerque: Summary of the Association of Biomolecular Resource Facilities Conference" by Pratik Jagtap at Biological Mass Spectrometry Meeting Group (Griffin Lab).

March 2014

 "The Galaxy framework as a unifying bioinformatics solution for 'omics' core facilities" by Pratik Jagtap at the "Association of BioMolecular Resource Facilities 2014 Conference" at Albuquerque, NM. See award winning poster here.

February 2014

"Metaproteomics: an opportunity-rich complement to metagenomics " by Tim Griffin at the Metagenomics Supergroup Meeting.

January 2014

"Large-scale multi-omic data integration and analysis: challenges and opportunities " by Tim Griffin at the Biomedical Informatics and Computational Biology Research Symposium.

December 2013

"Protein Mass Spectrometry" by LeeAnn Higgins for BIOC 4125 Laboratory in Molecular Biology

"Current Status of Proteomics Data Respositories & CPTAC Symposium Updates" by Pratik Jagtap at the Biological Mass Spectrometry Meeting Group (Griffin Lab).

November 2013

"Protein Mass Spectrometry" by LeeAnn Higgins for BIOC 4025 Laboratory in Biochemistry and BIOC 4125 Laboratory in Molecular Biology

"Introduction to Galaxy-P" by Tim Griffin and Pratik Jagtap for Andrews Lab at University of Minnesota Duluth Campus.

October 2013

"ProteoInformatics: Bioinformatic Approaches to Proteomics" by Pratik Jagtap for GERO 8021 Application of Proteomics to Aging

September 2013

"Mass Spectrometry Instrumentation" and "Quantitative Methods in Proteomics" by LeeAnn Higgins for GERO 8021 Application of Proteomics to Aging.

June 2013

"Introduction to Mass Spectrometry and Proteomics," by Thomas Krick and LeeAnn Higgins for the Life Sciences Summer Undergraduate Research Program (LSSURP)

Proteomics Presentations (MSI)

Proteomic Presentation Links