Current lab members and collaborators
| Candace Guerrero, Ph.D.Post-doctoral Researcher Education: B.S. Western Kentucky, ACS Chemistry and Biochemistry, 2007; Ph.D. University of California, Riverside, Analytical Chemistry, 2014 Research Interests: Analytical and bioinformatic method development for improving protein sequence coverage from MS-based proteomics data, applied to proteogenomic studies integrating RNA-seq and proteomic data. |
| Ebbing de Jong, Ph.D.Research Associate, Center for Mass Spectrometry and Proteomics Education: B.Sc. University of Guelph, Chemistry, 2001; Ph.D. University of Alberta, Analytical Chemistry, 2007 Research interests: Developing new methods for MS-based proteomic studies, with a current focus on targeted proteomic methods (e.g. SRM) development and optimization; application of these methods with a variety of laboratories through the Center for Mass Spectrometry and Proteomics. |
Undergraduate Researchers
- Kevin Murray
- Victoria Smith
- Mehdi Mulla
Major collaborators
Team members: Galaxy-P project for multi-omic data analysis applications
- James Johnson, Senior Software Developer, Minnesota Supercomputing Institute (Galaxy software developer)
- Trevor Wennblom, Senior Software Developer, Minnesota Supercomputing Institute (Galaxy software developer)
- Tom McGowan, Informatics Computing Consultant, Minnesota Supercomputing Institute (Galaxy software consultant)
- Getiria Onsongo, Informatics Analyst, Research Informatics Support Systems, Minnesota Supercomputing Institute (proteogenomic data analysis applications)
- Brian Sandri, Post-doctoral research associate, Chris Wendt Lab (proteogenomics and metaproteomics of lung disease)
- Somi Afiuni, Post-doctoral research associate, Amy Skubitz Lab(proteogenomics and metaproteomics of ovarian cancer)
- Matt Andrews Lab, University of Minnesota-Duluth (proteogenomics of mammalian hibernation)
Former Lab Members
Name, Years | Degree earned | Project | Current position |
|---|---|---|---|
Somi Afiuni 2011-2013 | Post-doctoral researcher | Methods for quantitative proteomic analysis of carbonylation | Post-doctoral researcher University of Minnesota (Amy Skubitz Lab) |
Sue van Riper 2008-2013 | Ph.D. | Developing new methods for label free quantitative proteomics | Proteomics Computational Manager University of Minnesota Informatics Institute |
Joel Kooren 2007-2013 | Ph.D. | Proteomic characterization of oral exudates in oral cancer | Post-doctoral researcher Cedars-Sinai Medical Center (Jenny van Eyk lab) |
Matt Stone 2008-2011 | Post-doctoral researcher | Proteomic approaches for biomarker discovery and PTM characterization | Senior MS Field Applications Specialist Waters Corporation |
Getiria Onsongo 2005-2011 | Ph.D. | Developing computational methods for quantitative proteomics and bioinformatic analysis | Informatics Analyst Research Informatics Support Systems Minnesota Supercomputing Institute |
Mikel Roe 2003-2009 | Ph.D. | Proteomic analysis of protein carbonylation | Post-doctoral researcher, University of Minnesota |
Sri Bandhakavi 2004-2010 | Post-doctoral researcher | Descriptive and quantitative proteomics in cells and fluids | Scientist diaDexus |
Hongwei Xie 2004-2007 | Post-doctoral researcher | Director of Mass Spectrometry, KBI Biopharma | Scientist KBI Biopharma |
Griffin Lab Contact Information
Laboratory: 7-166 MCB
Telephone: (612) 624-0381
Mailing Address:
420 Washington Ave SE
7-166 MCB
Minneapolis, MN 55455