Bazurto, J. V., Riazi, S., D'Alton, S., Deatherage, D. E., Bruger, E. L., Barrick, J. E., & Marx, C. J. (2021). Global Transcriptional Response of Methylorubrum extorquens to Formaldehyde Stress Expands the Role of EfgA and Is Distinct from Antibiotic Translational Inhibition. Microorganisms, 9(2), 347. https://doi.org/10.3390/microorganisms9020347
Bazurto, J. V., Nayak, D. D., Ticak, T., Davlieva, M., Lee, J. A., Hellenbrand, C. N., Lambert, L. B., Benski, O. J., Quates, C. J., Johnson, J. L., Patel, J. S., Ytreberg, F. M., Shamoo, Y., & Marx, C. J. (2021). EfgA is a conserved formaldehyde sensor that leads to bacterial growth arrest in response to elevated formaldehyde. PLoS Biology, 19(5), e3001208. https://doi.org/10.1371/journal.pbio.3001208
Bazurto, J. V., Bruger, E. L., Lee, J. A., Lambert, L. B., & Marx, C. J. (2021). Formaldehyde-responsive proteins, TtmR and EfgA, reveal a tradeoff between formaldehyde resistance and efficient transition to methylotrophy in Methylorubrum extorquens. Journal of Bacteriology, 203(9), e00589-20. https://doi.org/10.1128/JB.00589-20
Lee, J. A., Riazi, S., Nemati, S., Bazurto, J. V., Vasdekis, A. E., Ridenhour, B. J., Remien, C. H., & Marx, C. J. (2019). Microbial phenotypic heterogeneity in response to a metabolic toxin: Continuous, dynamically shifting distribution of formaldehyde tolerance in Methylobacterium extorquens populations. PLoS Genetics, 15(11), e1008458. https://doi.org/10.1371/journal.pgen.1008458
Downs D. M., Bazurto J. V., Gupta A., Fonseca L.L., and E. O. Voit. 2018. The three-legged stool of understanding metabolism: integrating metabolomics with biochemical genetics and computational modeling. AIMS Microbiology. 4(2): 289-303. doi: 10.3934/microbiol.2018.2.289
Bazurto J. V., Dearth, S. P., Tague, E. D., Campagna, S. R., and D. M. Downs. 2017. Untargeted metabolomics confirms and extends the understanding of the impact of aminoimidazole carboxamide ribotide (AICAR) in the metabolic network of Salmonella enterica. Microbial Cell. 5(2): 74-87.doi: 10.15698/mic2018.02.613
Bazurto J. V. and D. M. Downs. 2016. Metabolic network structure and function goes beyond conserved enzyme components. Microbial Cell. 3(1):260-262. doi: https://doi.org/10.15698/mic2016.06.509
Bazurto J. V., Farley K. R., and D. M. Downs. 2016. An unexpected route to an essential cofactor: Escherichia coli relies on threonine for thiamine biosynthesis. mBio. 7(1):e01840-15. doi: 10.1128/mBio.01840-15
Bazurto J. V., Heitman N. J., and D. M. Downs. 2015. Aminoimidazole carboxamide ribotide exerts opposing effects on thiamine synthesis in Salmonella enterica. J. Bacteriol. 197(17):2821-2830. doi: https://doi.org/10.1128/JB.00282-15
Bazurto J. V. and D. M. Downs. 2013. Amino-4-imidazolecarboxamide ribotide (AICAR) directly inhibits coenzyme A biosynthesis in Salmonella enterica. J. Bacteriol. 196(4):772-9.doi: https://doi.org/10.1128/JB.01087-13
Bazurto J. V. and D. M. Downs. 2013. Crosstalk. Brenner’s Encyclopedia of Genetics. San Diego, CA: Academic Press. Print.
Bazurto J. V. and D. M. Downs. 2011. Plasticity in the Purine–Thiamine Metabolic Network of Salmonella. Genetics. 187(2):623-631. doi: https://doi.org/10.1534/genetics.110.124362